Stereoselective Synthesis of Selenium-Containing Glycoconjugates via the Mitsunobu Reaction

A simple and efficient route for the synthesis of new glycoconjugates has been developed. The approach acts as a model for a mini-library of compounds with a deoxy-selenosugar core joined to a polyphenolic moiety with well-known antioxidant properties. An unexpected stereocontrol detected in the Mitsunobu key reaction led to the most attractive product showing a natural d-configuration. Thus, we were able to obtain the target molecules from the commercially available d-ribose via a shorter and convenient sequence of reactions.     

Nonperiodic boundary conditions for solvated systems

The simulation of charged and/or strongly polar solutes represents a challenge for standard molecular-dynamics techniques. The use of periodic boundary conditions (PBCs) leads to artifacts due to the interaction between two replicas in the presence of the long-range Coulomb forces. A way to avoid these problems is the use of nonperiodic boundary conditions. A possible realization is to consider a finite system, a sphere, embedded in a reaction field described by the method of the images. In the present work the modified image approximation has been implemented in a molecular-dynamics code and optimized for the use of two standard solvents, water and acetonitrile. The methodology has then been applied to investigate the conformational changes in water-solvated alanine dipeptide. The free-energy surface calculated with this method is comparable to that obtained with PBC.     

Determination of an ensemble of structures representing the denatured state of the bovine acyl-coenzyme a binding protein

The denatured state of a protein contains important information about the determinants of the folding process. By combining site-directed spin-labeling NMR experiments and restrained computer simulations, we have determined ensembles of conformations that represent the denatured state of the bovine acyl-coenzyme A binding protein (ACBP) at three different concentrations of guanidine hydrochloride. As the experimentally determined distance information corresponds to weighted averages over a broad ensemble of structures, we applied the experimental restraints to a system of noninteracting replicas of the protein by using a Monte Carlo sampling scheme. This procedure permits us to sample ensembles of conformations that are compatible with the experimental data and thus to obtain information regarding the distribution of structures in the denatured state. Our results show that the denatured state of ACBP is highly heterogeneous. The high sensitivity of the computational method that we present, however, enabled us to identify long-range interactions between two regions, located near the N- and C-termini, that include both native and non-native elements. The preferential formation of these contacts suggests that the sequence-dependent patterns of helical propensity and hydrophobicity are important determinants of the structure in the denatured state of ACBP.     

Nature of the oxomolybdenum-thiolate pi-bond: implications for Mo-S bonding in sulfite oxidase and xanthine oxidase

The electronic structure of cis,trans-(L-N(2)S(2))MoO(X) (where L-N(2)S(2) = N,N'-dimethyl-N,N'-bis(2-mercaptophenyl)ethylenediamine and X = Cl, SCH(2)C(6)H(5), SC(6)H(4)-OCH(3), or SC(6)H(4)CF(3)) has been probed by electronic absorption, magnetic circular dichroism, and resonance Raman spectroscopies to determine the nature of oxomolybdenum-thiolate bonding in complexes possessing three equatorial sulfur ligands. One of the phenyl mercaptide sulfur donors of the tetradentate L-N(2)S(2) chelating ligand, denoted S(180), coordinates to molybdenum in the equatorial plane such that the OMo-S(180)-C(phenyl) dihedral angle is approximately 180 degrees, resulting in a highly covalent pi-bonding interaction between an S(180) p orbital and the molybdenum d(xy) orbital. This highly covalent bonding scheme is the origin of an intense low-energy S --> Mo d(xy) bonding-to-antibonding LMCT transition (E(max) approximately 16000 cm(-)(1), epsilon approximately 4000 M(-)(1) cm(-)(1)). Spectroscopically calibrated bonding calculations performed at the DFT level of theory reveal that S(180) contributes approximately 22% to the HOMO, which is predominantly a pi antibonding molecular orbital between Mo d(xy) and the S(180) p orbital oriented in the same plane. The second sulfur donor of the L-N(2)S(2) ligand is essentially nonbonding with Mo d(xy) due to an OMo-S-C(phenyl) dihedral angle of approximately 90 degrees. Because the formal Mo d(xy) orbital is the electroactive or redox orbital, these Mo d(xy)-S 3p interactions are important with respect to defining key covalency contributions to the reduction potential in monooxomolybdenum thiolates, including the one- and two-electron reduced forms of sulfite oxidase. Interestingly, the highly covalent Mo-S(180) pi bonding interaction observed in these complexes is analogous to the well-known Cu-S(Cys) pi bond in type 1 blue copper proteins, which display electronic absorption and resonance Raman spectra that are remarkably similar to these monooxomolybdenum thiolate complexes. Finally, the presence of a covalent Mo-S pi interaction oriented orthogonal to the MOO bond is discussed with respect to electron-transfer regeneration in sulfite oxidase and Mo=S(sulfido) bonding in xanthine oxidase.     

Reactivite des carbanions benzyliques : VIII. Etude de la structure d'alkyl-9 lithio-10 dihydro-9,10 anthracenes par rmn du proton et spectrometrie d'absorption electronique; influence du substituant,du solvant et de la temperature

The structure of the 9,10-dihydroanthracenyl anion and of a series of 9-alkyl-10-lithio-9-10-dihydroanthracenes (9-R-10-LiDHA, I–V where R = H, Me, Et, i-Pr, t-Bu) was studied in solution by electronic absortion spectrometry and proton magnetic resonance. Our electronic absorption results, in addition to those of other authors, show that the contact ion pairs (c.i.p.) have an absorption at λ_max}- 400 nm (I–III) and 415 nm (V) whereas the loose ion pairs (l.i.p.) absorb at λmax}- 450 nm (I–V). In the NMR the chemical shift of the proton para with respect to the carbanionic center was examined as a function of solvent (THF, THF/HMPA, and in some cases ether or pure HMPA) and temperature (+20 to ?40°C). The para proton is shielded significantly with regard to the aromatic protons of the hydrocarbon (Δδ(H_para) ca. 1–1.7 ppm). The weakest shielding was observed in ether, in agreement with the existence of c.i.p. The largest shielding (THF/HMPA or pure HMPA) is in connection with the presence of l.i.p. where the negative charge is less localised at position 10. Moreover, in the same solvent, and at the same temperature, Δδ(H_para) was observed to increase with the substituent bulk, up to the point that there are only l.i.p. present. As found previously (namely for the fluorenyl anion) the l.i.p./c.i.p. ratio increases when temperature decreases. The results of this structural study allow to rationalize the protonation stereochemistry of 9-alkyl-10-lithio-9,10-dihydroanthracenes in the above-mentioned solvents.     

Transition metal complexes with long-chain amines thermal behaviour and crystal structure of (n-CaH2a+1NH2)2ZnCl2

The thermal behaviour of (n-C_aH_2n+1NH₂)₂ZnCl₂ complexes with n = 6, 8, … 16 has been investigated by DSC and by temperature variable IR and X-ray powder diffraction techniques. Complexes with n = 12,14,16 show solid—solid phase transition which are “melting” transitions of the hydrocarbon regions of the structure. The crystal structure of both the low and the high temperature polymorphs is characterized by the piling of sandwiches, each formed by an “inorganic” layer sandwiched between two alkylammonium layers.     

Examination of the electrophoretic behavior of liposomes

The electromigration of liposomes is a complex process resulting in many unexpected behaviors that are difficult to address with existing theories. In this study, the electrophoretic behaviors of liposome populations under various conditions were examined through the use of capillary electrophoresis and the results compared to classical electrokinetic, colloid, and spheroid theories. To elucidate the possible effects of applied field strength, bilayer rigidity, and surface charge on these behaviors, the electrophoretic mobilities of liposome populations were monitored while varying the applied potential, ionic strength of the medium, and the surface charge and cholesterol content of the liposomes. On the basis of comparisons made to the theoretical predictions, our results suggest that liposomal deformation and field-induced polarization may occur during electrophoresis and these mechanisms help to describe many of the observed behaviors.     

Evaluation of PTMSP membranes in achieving enhanced ethanol removal from fermentations by pervaporation

The use of membrane processes for the recovery of fermentation products has been gaining increased acceptance in recent years. Pervaporation has been studied in the past as a process for simultaneous fermentation and recovery of volatile products such as ethanol and butanol. However, membrane fouling and low permeate fluxes have imposed limitations on the effectiveness of the process. In this study, we characterize the performance of a substituted polyacetylene membrane, poly[(l-trimethylsilyl)-l-propyne] (PTMSP), in the recovery of ethanol from aqueous mixtures and fermentation broths. Pervaporation using PTMSP membranes shows a distinct advantage over conventional poly(dimethyl siloxane) (PDMS) membranes in ethanol removal. The flux with PTMSP is about threefold higher and the concentration factor is about twofold higher than the corresponding performance achieved with PDMS under similar conditions. The performance of PTMSP with fermentation broths shows a reduction in both flux and concentration factor relative to ethanol-water mixtures. However, the PTMSP membranes indicate initial promise of increased fouling resistance in operation with cell-containing fermentation broths.     

Hydrolysis of cellobiose by immobilized β-glucosidase entrapped in maintenance-free gel spheres

A crude preparation of Aspergillus niger β-glucosidase (27.5 cello-biase U/mg protein at 40°C, pH 5.0) was immobilized on concanavalin A-Sepharose (CAS). The cellobiase activity of the immobilized enzyme was 1334 U/mg dried CAS or 108 U/mL CAS gel. The β-glucosidase-CAS complex was entrapped within crosslinked propylene glycol alginate/bone-geletin gel spheres that possessed between 0.67 and 2.35 cellobiase U/mL spheres, depending on their size. The effect of cellobiose concentration (10–300 mM) on the activity of native, immobilized, and gel-entrapped enzyme was determined. It was shown that concentrations of cellobiose between 10 and 180 mM were not inhibitory to the entrapped enzyme, although inhibition was found to occur with the native and immobilized enzyme. Exogenous ion addition was not necessary to maintain the structural integrity of the spheres, which were stable for 4 d at 40°C.     

Properties of balanced and perfect matrices

In this paper we define wheel matrices and characterize some properties of matrices that are perfect but not balanced. A consequence of our results is that if a matrixA is perfect then we can construct a polynomial number of submatricesA _I,,A _n ofA such thatA is balanced if and only if all the submatricesA ₁,,A _n ofA are perfect. This implies that if the problem of testing perfection is polynomially solvable, then so is the problem of testing balancedness.Partial support under NSF Grants DMS-8606188, ECS-8800281 and DDM-8800281.